Fitness data for PS417_23865 in Pseudomonas simiae WCS417

XRE family transcriptional regulator
SEED: Sugar/maltose fermentation stimulation protein homolog
KEGG: sugar fermentation stimulation protein A

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-Valine (C) -0.6 -1.9 compare
phage JP1 MOI 0.1 -0.6 -2.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.5 -2.1 compare
carbon source Carbon source L-Ornithine 5 mM -0.5 -2.8 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -0.5 -1.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -2.2 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.5 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.8 compare
solid stress Fraxetin 0.5 mM; solid stress +0.4 +2.2 compare
soil soil sample 6; outgrowth in LB +0.4 +1.6 compare
carbon source Uridine (C) +0.4 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +1.1 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.0 compare
liquid stress Scopoletin 2 mM; liquid stress +0.5 +3.5 compare
solid stress Fraxetin 3 mM; solid stress +0.5 +2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.4 compare
seeds Growth on radish seeds for 72 hours +1.6 +3.0 compare