Fitness data for PS417_23790 in Pseudomonas simiae WCS417

sulfoxide reductase catalytic subunit YedY
SEED: Putative sulfite oxidase subunit YedY

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress Gentamicin 0.008 mg/ml -0.8 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.4 -1.4 compare
stress Spectinomycin 0.4 mg/ml -0.4 -2.5 compare
nitrogen source Adenine (N) -0.4 -2.0 compare
carbon source 2-Deoxy-D-Ribose (C) -0.4 -2.2 compare
phage P. simiae ORA MOI 0.1 -0.4 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.4 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.7 compare
carbon source RCH2_defined_glucose with MS_media 1x +0.4 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.6 compare
stress Polymyxin B sulfate 0.006 mg/ml +0.4 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.6 compare
phage P. simiae OR1 MOI 0.1 +0.5 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +1.4 compare
phage Wcs_1 +0.6 +2.2 compare