Fitness data for PS417_23705 in Pseudomonas simiae WCS417

Tryptophan 2,3-dioxygenase (EC 1.13.11.11) (from data)
Original annotation: tryptophan 2,3-dioxygenase
SEED: Tryptophan 2,3-dioxygenase (EC 1.13.11.11)
KEGG: tryptophan 2,3-dioxygenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source L-Tryptophan (C) -4.9 -7.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.3 -3.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.4 -3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.4 -2.8 compare
soil soil sample 6; outgrowth in LB -1.1 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -1.5 compare
supernatant control Vogels_fungal_media 0.1X -0.9 -2.0 compare
seeds Growth on radish seeds for 72 hours -0.8 -1.7 compare
soil soil sample 5; outgrowth in LB -0.8 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.8 -1.7 compare
phage moi 100 Time6-phageFRS -0.7 -2.5 compare
motility inner cut, LB soft agar motility assay -0.7 -2.3 compare
phage Wcs_0.1 -0.7 -2.2 compare
carbon source Carbon source L-Citrulline 10 mM +0.7 +1.6 compare
seeds Growth on radish seeds for 72 hours +0.7 +1.1 compare
nophagecontrol Only library +0.7 +1.7 compare
carbon source Carbon source D-Mannitol 5 mM +0.8 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.7 compare