Fitness data for PS417_23660 in Pseudomonas simiae WCS417

Catechol 1,2-dioxygenase (EC 1.13.11.1) (from data)
Original annotation: catechol 1,2-dioxygenase
SEED: Catechol 1,2-dioxygenase (EC 1.13.11.1)
KEGG: catechol 1,2-dioxygenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source L-Tryptophan (C) -3.1 -11.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.6 compare
phage P. simiae ORA MOI 1 -0.4 -2.0 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x -0.4 -2.2 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.4 -1.9 compare
soil soil sample 4; outgrowth in LB -0.4 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.3 +1.5 compare
solid stress 80% Methanol 3 mM; solid stress +0.4 +1.9 compare
phage JP1 MOI 10 +0.4 +1.4 compare
soil soil sample 3; outgrowth in LB +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.1 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.5 +2.3 compare
soil soil sample 5; outgrowth in LB +0.6 +2.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.0 compare
phage JP1 MOI 1 +0.8 +3.0 compare