Fitness data for PS417_23420 in Pseudomonas simiae WCS417

LuxR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.2 compare
phage P. simiae OR Antrim MOI 0.1 -0.7 -1.7 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.6 -2.3 compare
phage JP1 MOI 1 -0.6 -1.2 compare
stress Cobalt chloride 0.16 mM -0.6 -2.8 compare
stress 2-Furfuraldehyde 0.06 vol% -0.6 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -0.8 compare
solid stress Scopoletin 2 mM; solid stress -0.5 -2.9 compare
carbon source Carbon source D-Mannitol 5 mM +0.5 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.5 compare
phage P. simiae OR1 MOI 0.1 +0.6 +1.5 compare
carbon source L-Valine (C) +0.6 +1.2 compare
phage P. simiae OR Antrim MOI 10 +0.6 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.7 compare
solid stress Scopoletin 2 mM; solid stress +0.7 +3.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.9 +1.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +1.7 compare
seeds Growth on radish seeds for 72 hours +1.1 +1.7 compare