Fitness data for PS417_23205 in Pseudomonas simiae WCS417

transcriptional regulator
SEED: Iron-sulfur cluster regulator IscR
KEGG: Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
stress Gentamicin 0.008 mg/ml -2.1 -2.3 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -1.7 -6.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5 -2.3 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.4 -2.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3 -2.7 compare
phage P. simiae OR Antrim MOI 0.1 -1.3 -1.8 compare
root root sample 6; outgrowth in LB -1.3 -2.9 compare
soil soil sample 8; outgrowth in LB -1.2 -2.6 compare
no stress control on plate growth on LB_noSalt plate -1.2 -2.0 compare
phage JP1 MOI 10 -1.2 -2.8 compare
stress R2A with Fusaric 120 ug/mL +1.2 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.5 +3.2 compare
stress R2A with Fusaric 120 ug/mL +1.5 +6.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.5 +6.0 compare
stress R2A with Fusaric 120 ug/mL +1.6 +8.9 compare
stress R2A with Fusaric 120 ug/mL +1.7 +9.6 compare
stress R2A with Fusaric 120 ug/mL +1.9 +12.2 compare
stress R2A with Fusaric 120 ug/mL +2.1 +14.3 compare
stress Cobalt chloride 0.16 mM +2.4 +3.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +2.8 +3.5 compare