Fitness data for PS417_23160 in Pseudomonas simiae WCS417

50S rRNA methyltransferase
SEED: Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)
KEGG: ribosomal RNA large subunit methyltransferase N

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.9 -3.2 compare
motility inner cut, LB soft agar motility assay -1.6 -1.7 compare
motility outer cut, LB soft agar motility assay -1.5 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -2.3 compare
motility outer cut, LB soft agar motility assay -1.3 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.5 compare
supernatant control Vogels_fungal_media 0.1X -1.2 -1.5 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -1.2 -2.1 compare
motility inner cut, LB soft agar motility assay -1.2 -2.1 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.2 -1.4 compare
solid stress Fraxetin 3 mM; solid stress -1.1 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -2.5 compare
motility_chemotaxis Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.1 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.0 -1.7 compare
phage JP1 MOI 10 -1.0 -1.9 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.0 -1.6 compare