Fitness data for PS417_23050 in Pseudomonas simiae WCS417

trehalose PTS system, EII-BC components TreB (from data)
Original annotation: trehalose permease IIC protein
SEED: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69)
KEGG: PTS system, trehalose-specific IIB component ; PTS system, trehalose-specific IIC component

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
carbon source D-Trehalose (C) -4.1 -6.5 compare
carbon source D-Trehalose (C) -4.0 -4.3 compare
carbon source L-Valine (C) -1.1 -1.8 compare
phage P. simiae ORA MOI 0.1 -0.9 -1.4 compare
stress 1-ethyl-3-methylimidazolium acetate 35 mM -0.8 -2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.8 -1.7 compare
phage Wcs_1 -0.7 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.5 compare
phage P. simiae ORA MOI 0.1 -0.6 -1.0 compare
carbon source L-Valine (C) -0.6 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.6 -1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.7 compare
stress LB_noSalt with Chloride 1100 mM +0.6 +4.0 compare
solid stress Fraxetin 3 mM; solid stress +0.7 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +3.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +0.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +0.7 compare