Fitness data for PS417_23040 in Pseudomonas simiae WCS417

D-trehalose outer membrane porin (from data)
Original annotation: maltoporin
SEED: Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein)
KEGG: maltoporin

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Trehalose (C) -3.6 -13.3 compare
carbon source D-Trehalose (C) -3.4 -12.4 compare
stress 1-ethyl-3-methylimidazolium acetate 35 mM -0.3 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -2.1 compare
stress 2-Furfuraldehyde 0.06 vol% -0.3 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 -2.4 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -1.8 compare
solid stress Fraxetin 2 mM; solid stress +0.3 +2.3 compare
carbon source D-Glucosamine Hydrochloride (C) +0.3 +2.2 compare
motility inner cut, LB soft agar motility assay +0.3 +1.9 compare
carbon source octanoate (C) +0.3 +2.5 compare
solid stress Fraxetin 3 mM; solid stress +0.3 +2.5 compare
solid stress Fraxetin 3 mM; solid stress +0.4 +2.7 compare
carbon source D-Glucosamine Hydrochloride (C) +0.4 +2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +2.6 compare
carbon source NAG (C) +0.4 +3.2 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.4 +3.0 compare
solid stress Fraxetin 3 mM; solid stress +0.4 +2.7 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.7 +5.4 compare