Fitness data for PS417_22995 in Pseudomonas simiae WCS417

PTS N-acetyl-D-glucosamine transporter
SEED: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphotransferase system, phosphocarrier protein HPr / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
KEGG: PTS system, fructose-specific IIA component ; phosphotransferase system, enzyme I, PtsI ; phosphocarrier protein FPr

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source NAG (C) -5.8 -9.1 compare
carbon source NAG (C) -4.2 -7.3 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.6 -1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB +0.5 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +2.1 compare
solid stress Fraxetin 2 mM; solid stress +0.7 +3.1 compare
soil soil sample 3; outgrowth in LB +0.7 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.9 +3.0 compare
soil soil sample 6; outgrowth in LB +0.9 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9 +1.4 compare
soil soil sample 5; outgrowth in LB +1.0 +1.1 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +1.0 +1.0 compare
soil soil sample 4; outgrowth in LB +1.1 +1.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +1.1 +0.9 compare
soil soil sample 7; outgrowth in LB +1.1 +1.7 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +1.2 +1.1 compare
root root sample 6; outgrowth in LB +1.3 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +2.8 compare