Fitness data for PS417_22965 in Pseudomonas simiae WCS417

DNA mismatch repair protein MutT
SEED: Hypothetical nudix hydrolase YeaB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source L-Valine (C) -1.0 -2.8 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.6 -2.7 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.6 -3.0 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.6 -2.7 compare
solid stress Fraxetin 3 mM; solid stress -0.6 -2.1 compare
stress Gentamicin 0.008 mg/ml -0.6 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.7 compare
carbon source m-Inositol (C) +0.6 +4.3 compare
seeds Growth on radish seeds for 72 hours +0.6 +1.8 compare
phage P. simiae Grant Run MOI 0.1 +0.6 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.3 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.7 +1.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +3.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.0 +3.4 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.4 +8.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.5 +8.8 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.6 +6.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +2.1 +12.5 compare