Fitness data for PS417_22940 in Pseudomonas simiae WCS417

MFS transporter
SEED: Permeases of the major facilitator superfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -3.0 compare
phage P. simiae ORA MOI 0.1 -0.4 -1.6 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 -1.5 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 -1.3 compare
phage P. simiae Grant Run MOI 0.1 -0.4 -2.1 compare
carbon source succinate (C) -0.4 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Cysteine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.4 -1.7 compare
stress Gentamicin 0.008 mg/ml -0.4 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +2.6 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +0.9 compare
phage P. simiae OR1 MOI 0.1 +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +0.7 compare
seeds Growth on radish seeds for 72 hours +0.5 +1.5 compare
seeds Growth on radish seeds for 72 hours +0.6 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +3.4 compare