Fitness data for PS417_22900 in Pseudomonas simiae WCS417

cytochrome C oxidase subunit II
SEED: cytosolic long-chain acyl-CoA thioester hydrolase family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -0.9 -1.5 compare
phage P. simiae OR Antrim MOI 1 -0.9 -3.1 compare
phage JP1 MOI 10 -0.8 -1.7 compare
stress Doxycycline hyclate 0.001 mg/ml -0.7 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.6 -2.2 compare
root root sample 6; outgrowth in LB -0.6 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.6 compare
carbon source L-Valine (C) -0.5 -0.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.4 compare
carbon source Carbon source L-Citrulline 10 mM +0.6 +2.3 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.6 +1.4 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.6 +1.5 compare
stress methylglyoxal 0.032 vol% +0.6 +2.6 compare
seeds Growth on radish seeds for 72 hours +0.6 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.7 compare
phage P. simiae Grant Run MOI 10 +0.7 +1.9 compare
phage JP1 MOI 0.1 +0.8 +3.3 compare
phage P. simiae ORA MOI 0.1 +0.8 +2.6 compare