Fitness data for PS417_22700 in Pseudomonas simiae WCS417

RNA polymerase subunit sigma-24
SEED: FIG006045: Sigma factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
solid stress Fraxetin 3 mM; solid stress -1.5 -3.5 compare
solid stress Fraxetin 3 mM; solid stress -1.4 -3.4 compare
solid stress Fraxetin 2 mM; solid stress -1.2 -2.7 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.2 -2.4 compare
solid stress Fraxetin 2 mM; solid stress -1.0 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -2.1 compare
solid stress Fraxetin 3 mM; solid stress -1.0 -0.9 compare
motility outer cut, LB soft agar motility assay -0.9 -1.3 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x -0.9 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.3 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.8 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.8 -2.0 compare
seeds Growth on radish seeds for 72 hours +0.8 +0.8 compare
root root sample 6; outgrowth in LB +0.9 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +4.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.4 +4.2 compare
seeds Growth on radish seeds for 72 hours +1.4 +2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.8 +6.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +2.3 +4.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +5.5 +19.6 compare