Fitness data for PS417_22580 in Pseudomonas simiae WCS417

membrane protein
SEED: INTEGRAL MEMBRANE PROTEIN (Rhomboid family)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage Wcs_0.1 -1.7 -3.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.6 -2.3 compare
carbon source RCH2_defined_glucose with MS_media 1x -1.2 -4.2 compare
phage P. simiae OR1 MOI 0.1 -1.2 -2.1 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -1.1 -2.5 compare
stress methylglyoxal 0.032 vol% -1.1 -1.6 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.9 -3.2 compare
carbon source Carbon source L-Ornithine 10 mM -0.9 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +1.3 compare
phage P. simiae ORA MOI 1 +0.9 +1.9 compare
phage JP1 MOI 10 +0.9 +1.3 compare
phage JP1 MOI 0.1 +1.0 +1.8 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +1.0 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.1 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.1 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.1 +1.6 compare
carbon source L-Valine (C) +1.2 +2.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.2 +2.3 compare