Fitness data for PS417_22150 in Pseudomonas simiae WCS417

D-mannose isomerase (EC 5.3.1.7) (from data)
Original annotation: sugar isomerase
SEED: N-acylglucosamine 2-epimerase (EC 5.1.3.8)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source D-Mannose (C) -3.5 -9.0 compare
carbon source D-Mannose (C) -3.3 -7.0 compare
carbon source L-Valine (C) -0.8 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.8 -2.7 compare
phage P. simiae OR Antrim MOI 0.1 -0.7 -1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.7 -1.5 compare
stress Cisplatin 0.01 mg/ml -0.7 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.8 +1.9 compare
carbon source D-Sorbitol (C) +0.8 +3.4 compare
stress methylglyoxal 0.032 vol% +0.8 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.6 compare
seeds Growth on radish seeds for 24 hours +0.8 +2.6 compare
nophagecontrol Only library +0.8 +2.6 compare
stress Phosphomycin 0.001 mg/ml +0.9 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +2.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.0 +3.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +3.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +1.9 compare
soil soil sample 5; outgrowth in LB +1.1 +1.8 compare