Fitness data for PS417_22145 in Pseudomonas simiae WCS417

glucose/xylose ABC transporter, periplasmic substrate-binding component (from data)
Original annotation: sugar ABC transporter substrate-binding protein
SEED: Glucose ABC transport system, periplasmic sugar-binding protein
KEGG: multiple sugar transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source D-Glucose-6-Phosphate (C) -3.2 -10.2 compare
root root sample 6; outgrowth in LB -2.1 -6.2 compare
carbon source D-Glucose-6-Phosphate (C) -2.0 -9.0 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.9 -6.3 compare
carbon source D-Xylose (C) -1.8 -7.4 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.7 -7.7 compare
carbon source D-Xylose (C) -1.6 -9.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.6 -8.1 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.3 -3.9 compare
soil soil sample 6; outgrowth in LB -1.2 -3.6 compare
carbon source D-Mannose (C) -1.2 -7.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.2 -4.9 compare
soil soil sample 7; outgrowth in LB -1.1 -3.9 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -1.1 -3.6 compare
soil soil sample 2; outgrowth in LB -1.0 -3.4 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -4.1 compare
soil soil sample 5; outgrowth in LB -0.8 -2.5 compare
nitrogen source Urea (N) -0.8 -4.2 compare
carbon source D-Glucosamine Hydrochloride (C) +7.7 +43.3 compare
carbon source D-Glucosamine Hydrochloride (C) +8.3 +50.1 compare