Fitness data for PS417_22135 in Pseudomonas simiae WCS417

glucose/xylose ABC transporter, permease component 1 (from data)
Original annotation: sugar ABC transporter permease
SEED: Glucose ABC transport system, inner membrane component 2
KEGG: multiple sugar transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source D-Glucose-6-Phosphate (C) -3.8 -13.8 compare
root root sample 6; outgrowth in LB -2.4 -7.4 compare
carbon source D-Glucose-6-Phosphate (C) -2.3 -11.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.0 -10.7 compare
soil soil sample 4; outgrowth in LB -2.0 -9.0 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.8 -6.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.6 -6.1 compare
carbon source D-Xylose (C) -1.6 -9.3 compare
carbon source D-Xylose (C) -1.6 -9.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.6 -5.2 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.6 -5.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5 -7.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.4 -5.3 compare
soil soil sample 6; outgrowth in LB -1.3 -6.3 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -1.1 -3.8 compare
soil soil sample 2; outgrowth in LB -1.0 -4.3 compare
soil soil sample 5; outgrowth in LB -0.9 -2.7 compare
soil soil sample 7; outgrowth in LB -0.9 -2.8 compare
carbon source D-Glucosamine Hydrochloride (C) +7.3 +37.3 compare
carbon source D-Glucosamine Hydrochloride (C) +7.9 +38.7 compare