Fitness data for PS417_22005 in Pseudomonas simiae WCS417

epimerase
SEED: UDP-glucose 4-epimerase (EC 5.1.3.2)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.5 -1.6 compare
phage P. simiae OR1 MOI 0.1 -1.3 -1.9 compare
phage P. simiae Grant Run MOI 10 -1.2 -2.3 compare
phage P. simiae OR Antrim MOI 10 -1.1 -1.5 compare
phage P. simiae Grant Run MOI 10 -1.1 -2.2 compare
phage P. simiae OR Antrim MOI 0.1 -1.0 -1.9 compare
phage moi 100 Time6-phageFRS -0.9 -1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.9 -1.7 compare
stress 1-ethyl-3-methylimidazolium acetate 35 mM -0.9 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.1 compare
supernatant control Vogels_fungal_media 0.1X +0.8 +1.7 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.8 +2.0 compare
solid stress 80% Methanol 2 mM; solid stress +0.8 +2.0 compare
phage JP1 MOI 0.1 +0.8 +1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.3 +2.8 compare
root root sample 6; outgrowth in LB +1.6 +2.0 compare