Fitness data for PS417_21910 in Pseudomonas simiae WCS417

LamB/YcsF family protein
SEED: Lactam utilization protein LamB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.4 compare
seeds Growth on radish seeds for 72 hours -0.5 -2.3 compare
phage JP1 MOI 10 -0.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.4 compare
nophagecontrol Only library -0.4 -1.9 compare
phage JP1 MOI 0.1 -0.4 -2.0 compare
phage JP1 MOI 1 -0.4 -2.2 compare
soil soil sample 3; outgrowth in LB -0.4 -1.7 compare
stress Paraquat dichloride 0.008 mg/ml -0.4 -2.2 compare
supernatant control Vogels_fungal_media 0.1X -0.4 -1.5 compare
motility outer cut, LB soft agar motility assay +0.4 +2.1 compare
nophagecontrol TIme6-nophage +0.4 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.7 compare
soil soil sample 5; outgrowth in LB +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.3 compare
carbon source L-Valine (C) +0.6 +2.3 compare
stress Doxycycline hyclate 0.001 mg/ml +0.6 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.8 compare