Fitness data for PS417_21905 in Pseudomonas simiae WCS417

allophanate hydrolase
SEED: Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. simiae OR Antrim MOI 0.1 -0.7 -2.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.7 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.6 -1.3 compare
phage P. simiae OR1 MOI 0.1 -0.6 -1.7 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.5 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.7 compare
soil soil sample 5; outgrowth in LB -0.5 -1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -2.2 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.4 -2.3 compare
carbon source Deoxyribonucleic from herring sperm 5 mg/mL (C) -0.4 -2.2 compare
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 500 uM; timepoint 1 -0.4 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +0.9 compare
motility inner cut, LB soft agar motility assay +0.4 +1.6 compare
solid stress 80% Methanol 1 mM; solid stress +0.5 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +1.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +2.4 compare