Fitness data for PS417_02175 in Pseudomonas simiae WCS417

transcriptional regulator
SEED: Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
KEGG: proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.9)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -6.0 -3.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.6 -2.5 compare
carbon source L-Citrulline (C) -5.1 -3.5 compare
carbon source Carbon source L-Citrulline 5 mM -4.4 -4.3 compare
carbon source Carbon source L-Citrulline 10 mM -3.8 -4.0 compare
carbon source Carbon source L-Ornithine 5 mM -3.6 -4.3 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -3.0 -3.5 compare
carbon source Carbon source L-Citrulline 5 mM -3.0 -2.9 compare
carbon source Carbon source L-Ornithine 10 mM -2.8 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.8 -2.8 compare
carbon source Carbon source L-Ornithine 5 mM -2.8 -3.0 compare
carbon source L-Citrulline (C) -2.7 -5.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.7 -2.0 compare
carbon source Carbon source L-Citrulline 10 mM -2.5 -4.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.5 -2.0 compare
carbon source Carbon source L-Ornithine 10 mM -2.3 -2.2 compare
solid stress Fraxetin 3 mM; solid stress -2.0 -3.6 compare
soil soil sample 2; outgrowth in LB -1.9 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.1 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.4 +1.9 compare