Fitness data for PS417_21850 in Pseudomonas simiae WCS417

LysR family transcriptional regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
soil soil sample 5; outgrowth in LB -2.7 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -2.4 -1.9 compare
soil soil sample 4; outgrowth in LB -2.1 -1.2 compare
phage P. simiae OR1 MOI 0.1 -1.8 -0.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.7 -1.1 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.7 -1.0 compare
nitrogen source Adenine (N) -1.6 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.6 -0.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.5 -0.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 -0.9 compare
nophagecontrol Only library -1.5 -1.0 compare
stress Gentamicin 0.008 mg/ml -1.4 -1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.4 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -1.3 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -0.8 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x -1.2 -1.5 compare
phage P. simiae ORA MOI 0.1 +1.3 +1.5 compare
seeds Growth on radish seeds for 72 hours +1.4 +1.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +2.4 +3.6 compare
seeds Growth on radish seeds for 72 hours +3.2 +2.9 compare