Fitness data for PS417_21780 in Pseudomonas simiae WCS417

argininosuccinate lyase
SEED: Argininosuccinate lyase (EC 4.3.2.1)
KEGG: argininosuccinate lyase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
soil soil sample 2; outgrowth in LB -1.9 -1.9 compare
liquid stress Fraxetin 3 mM; liquid stress -1.3 -4.1 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.2 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -2.5 compare
solid stress Fraxetin 3 mM; solid stress -1.0 -1.8 compare
phage JP1 MOI 10 -1.0 -1.4 compare
phage moi 100 Time6-phageFRS -0.9 -1.6 compare
motility inner cut, LB soft agar motility assay -0.9 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.5 compare
phage P. simiae OR Antrim MOI 1 -0.8 -2.1 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.8 +1.8 compare
solid stress 80% Methanol 2 mM; solid stress +0.9 +2.0 compare
carbon source D-Glucosamine Hydrochloride (C) +0.9 +2.6 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +0.9 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +3.1 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +1.2 +3.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.4 +2.0 compare
seeds Growth on radish seeds for 72 hours +1.6 +4.2 compare