Fitness data for PS417_21735 in Pseudomonas simiae WCS417

ABC transporter for L-Arginine, permease component 2 (from data)
Original annotation: amino acid ABC transporter permease
SEED: Arginine/ornithine ABC transporter, permease protein AotM
KEGG: arginine/ornithine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source L-Arginine (C) -2.8 -11.9 compare
carbon source L-Arginine (C) -2.4 -9.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -5.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -5.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.0 -5.1 compare
carbon source Carbon source L-Ornithine 5 mM -0.9 -5.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -3.7 compare
carbon source Carbon source L-Ornithine 10 mM -0.9 -5.8 compare
carbon source Carbon source L-Ornithine 10 mM -0.8 -4.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -4.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.7 -3.0 compare
carbon source Carbon source L-Ornithine 5 mM -0.7 -4.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.7 compare
stress methylglyoxal 0.032 vol% -0.7 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -3.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -3.9 compare
carbon source Gly-Glu (C) +0.7 +2.6 compare
carbon source L-Alanine (C) +0.7 +5.3 compare
carbon source L-Alanine (C) +0.8 +5.6 compare
carbon source octanoate (C) +0.8 +5.7 compare