Fitness data for PS417_21710 in Pseudomonas simiae WCS417

Succinylornithine transaminase (EC 2.6.1.81) (from data)
Original annotation: acetylornithine aminotransferase
SEED: Succinylornithine transaminase (EC 2.6.1.81)
KEGG: acetylornithine/N-succinyldiaminopimelate aminotransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source L-Arginine (C) -4.1 -6.9 compare
carbon source L-Arginine (C) -3.6 -4.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.5 -3.4 compare
carbon source Carbon source L-Ornithine 10 mM -1.9 -4.9 compare
carbon source Carbon source L-Ornithine 5 mM -1.9 -5.8 compare
liquid stress Scopoletin 1 mM; liquid stress -1.2 -3.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.2 -2.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.2 -3.2 compare
soil soil sample 3; outgrowth in LB -1.2 -1.5 compare
carbon source Carbon source L-Ornithine 10 mM -1.1 -4.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -2.4 compare
carbon source Gly-Glu (C) -1.0 -1.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0 -2.3 compare
motility outer cut, LB soft agar motility assay -1.0 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.0 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +1.9 compare
carbon source Trisodium citrate (C) +1.1 +5.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +2.0 +6.4 compare