Fitness data for PS417_21500 in Pseudomonas simiae WCS417

C4 dicarboxylate transporter DctA (from data)
Original annotation: C4-dicarboxylate transporter
KEGG: aerobic C4-dicarboxylate transport protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source succinate (C) -1.8 -8.0 compare
carbon source succinate (C) -1.3 -4.5 compare
carbon source octanoate (C) -1.0 -3.9 compare
carbon source octanoate (C) -0.9 -3.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.8 -2.9 compare
stress Paraquat dichloride 0.008 mg/ml -0.6 -2.7 compare
root root sample 6; outgrowth in LB -0.6 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.1 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.3 compare
stress Doxycycline hyclate 0.001 mg/ml -0.5 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +3.0 compare
soil soil sample 3; outgrowth in LB +0.5 +1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +2.1 compare
carbon source L-Valine (C) +0.6 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.6 +2.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +3.4 compare
stress Gentamicin 0.008 mg/ml +0.9 +2.2 compare