Fitness data for PS417_21495 in Pseudomonas simiae WCS417

lipoprotein
SEED: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
KEGG: xanthine dehydrogenase accessory factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source 2-Deoxy-D-Ribose (C) -4.2 -4.0 compare
carbon source 2-Deoxy-D-Ribose (C) -2.1 -2.8 compare
carbon source 2-Deoxy-D-Ribose (C) -2.0 -2.6 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -1.9 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -2.7 compare
carbon source 2-Deoxy-D-Ribose (C) -1.7 -3.1 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -1.4 -1.7 compare
soil soil sample 3; outgrowth in LB -1.0 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9 -2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB -0.9 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.9 -2.4 compare
solid stress Fraxetin 2 mM; solid stress -0.8 -3.0 compare
phage P. simiae Grant Run MOI 0.1 -0.8 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -2.0 compare
phage P. simiae OR Antrim MOI 10 +0.7 +1.0 compare
phage P. simiae ORA MOI 1 +0.8 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.9 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9 +1.0 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.0 +1.8 compare