Fitness data for PS417_21475 in Pseudomonas simiae WCS417

HAD family hydrolase
SEED: Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C
KEGG: phosphoglycolate phosphatase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.1 -2.9 compare
phage JP1 MOI 1 -1.9 -2.6 compare
nitrogen source Glycine (N) -1.6 -3.3 compare
soil soil sample 5; outgrowth in LB -1.3 -1.7 compare
liquid stress Scopoletin 2 mM; liquid stress -1.3 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.6 compare
stress Gentamicin 0.008 mg/ml -1.2 -1.5 compare
soil soil sample 6; outgrowth in LB -1.2 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -1.1 compare
phage Wcs_1 -0.9 -1.5 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.9 -1.4 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +1.0 +1.9 compare
phage JP1 MOI 10 +1.0 +2.2 compare
motility outer cut, LB soft agar motility assay +1.2 +3.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.2 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.3 +2.2 compare
motility inner cut, LB soft agar motility assay +1.4 +3.8 compare
phage P. simiae OR1 MOI 0.1 +1.5 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +1.8 +1.8 compare