Fitness data for PS417_21470 in Pseudomonas simiae WCS417

peptidase S49
SEED: Periplasmic serine proteases (ClpP class)
KEGG: protease IV

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress Gentamicin 0.008 mg/ml -0.5 -2.8 compare
stress L-Lysine 60 mM -0.5 -3.5 compare
seeds Growth on radish seeds for 72 hours -0.4 -1.9 compare
phage JP1 MOI 10 -0.3 -1.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.3 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.3 -2.2 compare
stress Choline Lysine 25 mM -0.3 -2.0 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.3 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.4 compare
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 2 +0.3 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.3 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +2.1 compare
soil soil sample 6; outgrowth in LB +0.3 +1.0 compare
stress methylglyoxal 0.032 vol% +0.4 +1.6 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.4 +1.2 compare
soil soil sample 2; outgrowth in LB +0.5 +1.4 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.5 +1.6 compare
root root sample 6; outgrowth in LB +0.6 +1.3 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.7 +1.7 compare