| group | condition | fitness | t score | |
|---|
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI | -0.1 | -0.7 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI | +0.1 | +0.3 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI | -0.1 | -0.3 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI | +0.1 | +0.6 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI | -0.4 | -1.5 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI | -0.3 | -1.7 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI | -0.5 | -2.9 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI | -0.7 | -4.5 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant | -0.3 | -1.6 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant | -1.1 | -4.3 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant | -0.7 | -3.2 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant | -1.0 | -4.6 | compare |
| Taped volatile agar plate with Trichoderma atroviridae IMI | +0.0 | +0.1 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | -0.1 | -0.2 | compare |
| Parafilmed volatile agar plate with no fungus | +0.3 | +1.6 | compare |
| Parafilmed volatile agar plate with no fungus | -0.6 | -3.2 | compare |
| Parafilmed volatile agar plate with no fungus | -0.6 | -2.8 | compare |
| Parafilmed volatile agar plate with no fungus | -0.9 | -3.0 | compare |
| Parafilmed volatile agar plate with no fungus | -0.2 | -0.7 | compare |
| Taped volatile agar plate with no fungus | +0.0 | +0.1 | compare |
| Taped volatile agar plate with no fungus | -0.1 | -0.4 | compare |
| carbon source | 2'-Deoxyinosine 5 mM (C) | -2.9 | -9.4 | compare |
| 2'-Deoxyinosine 5 mM (C) | -3.8 | -9.7 | compare |
| 2-Deoxy-D-ribonic lithium salt (C) | +0.1 | +0.4 | compare |
| 2-Deoxy-D-ribonic lithium salt 10 mM (C) | +0.2 | +1.2 | compare |
| 2-Deoxy-D-ribonic lithium salt 10 mM (C) | -0.1 | -0.3 | compare |
| 2-Deoxy-D-Ribose (C) | -3.3 | -12.9 | compare |
| 2-Deoxy-D-Ribose (C) | -3.9 | -9.6 | compare |
| 2-Deoxy-D-Ribose 10 mM (C) | -3.0 | -8.6 | compare |
| 2-Deoxy-D-Ribose 10 mM (C) | -2.8 | -10.3 | compare |
| 2-Deoxy-D-Ribose (C) | -2.6 | -15.5 | compare |
| 2-Deoxy-D-Ribose (C) | -2.7 | -12.2 | compare |
| a-Ketoglutaric (C) | -0.1 | -0.4 | compare |
| a-Ketoglutaric (C) | +0.0 | +0.1 | compare |
| Cytidine (C) | -0.4 | -3.0 | compare |
| Cytidine (C) | -0.5 | -2.5 | compare |
| D-Alanine (C) | -0.3 | -1.9 | compare |
| D-Alanine (C) | -0.3 | -1.9 | compare |
| D-Fructose (C) | -0.1 | -0.8 | compare |
| D-Fructose (C) | -0.3 | -2.1 | compare |
| D-Galactose (C) | -0.2 | -1.4 | compare |
| D-Galactose (C) | -0.2 | -1.2 | compare |
| D-Galacturonic Acid (C) | -0.2 | -1.3 | compare |
| D-Galacturonic Acid (C) | -0.3 | -1.6 | compare |
| D-Gluconic Acid (C) | -0.1 | -1.0 | compare |
| D-Gluconic Acid (C) | -0.2 | -1.5 | compare |
| D-Glucosamine Hydrochloride (C) | -0.2 | -1.5 | compare |
| D-Glucosamine Hydrochloride (C) | -0.2 | -0.9 | compare |
| D-Glucose (C) | +0.1 | +0.4 | compare |
| D-Glucose (C) | -0.0 | -0.1 | compare |
| D-Glucose (C) | +0.0 | +0.3 | compare |
| D-Glucose-6-Phosphate (C) | -0.1 | -0.4 | compare |
| D-Glucose-6-Phosphate (C) | -0.2 | -1.4 | compare |
| Carbon source D-Mannitol 2.5 mM | -0.8 | -3.5 | compare |
| Carbon source D-Mannitol 2.5 mM | -0.6 | -3.2 | compare |
| Carbon source D-Mannitol 5 mM | -0.7 | -4.2 | compare |
| Carbon source D-Mannitol 5 mM | -0.5 | -2.4 | compare |
| Carbon source D-Mannitol 10 mM | -0.7 | -4.1 | compare |
| Carbon source D-Mannitol 10 mM | -0.5 | -2.5 | compare |
| D-Mannose (C) | -0.2 | -1.2 | compare |
| D-Mannose (C) | -0.2 | -1.2 | compare |
| D-Ribose (C) | -0.1 | -0.8 | compare |
| D-Ribose (C) | -0.2 | -1.2 | compare |
| D-Sorbitol (C) | -0.3 | -2.0 | compare |
| D-Sorbitol (C) | -0.1 | -0.4 | compare |
| D-Trehalose (C) | -0.1 | -0.8 | compare |
| D-Trehalose (C) | -0.2 | -1.6 | compare |
| D-Xylose (C) | -0.1 | -0.5 | compare |
| D-Xylose (C) | -0.1 | -0.6 | compare |
| Deoxyribonucleic from herring sperm 5 mg/mL (C) | -1.5 | -7.7 | compare |
| Deoxyribonucleic from herring sperm 5 mg/mL (C) | -1.7 | -11.2 | compare |
| Deoxyribonucleic from herring sperm 10 mg/mL (C) | -1.8 | -5.9 | compare |
| Deoxyribonucleic from herring sperm 10 mg/mL (C) | -2.6 | -10.8 | compare |
| Ethanol (C) | -0.2 | -1.0 | compare |
| Ethanol (C) | -0.3 | -2.2 | compare |
| Gly-Glu (C) | -0.1 | -0.6 | compare |
| Gly-Glu (C) | -0.2 | -1.0 | compare |
| Glycerol (C) | -0.3 | -1.8 | compare |
| Inosine (C) | -3.1 | -10.5 | compare |
| Inosine (C) | -2.6 | -13.3 | compare |
| L-Alanine (C) | -0.1 | -1.0 | compare |
| L-Alanine (C) | -0.3 | -1.7 | compare |
| L-Arabinose (C) | +0.1 | +0.7 | compare |
| L-Arabinose (C) | -0.0 | -0.1 | compare |
| L-Arginine (C) | -0.2 | -1.3 | compare |
| L-Arginine (C) | -0.2 | -1.8 | compare |
| L-Asparagine (C) | -0.1 | -0.9 | compare |
| L-Asparagine (C) | -0.1 | -0.4 | compare |
| Carbon source L-Citrulline 5 mM | -0.8 | -4.0 | compare |
| Carbon source L-Citrulline 5 mM | -0.8 | -4.1 | compare |
| Carbon source L-Citrulline 10 mM | -0.4 | -2.4 | compare |
| Carbon source L-Citrulline 10 mM | -0.7 | -3.9 | compare |
| L-Citrulline (C) | -0.5 | -3.1 | compare |
| L-Citrulline (C) | -0.4 | -2.8 | compare |
| L-Glutamine (C) | -0.0 | -0.2 | compare |
| L-Glutamine (C) | -0.0 | -0.3 | compare |
| L-Histidine (C) | -1.0 | -5.2 | compare |
| L-Histidine (C) | -0.7 | -4.1 | compare |
| L-Isoleucine (C) | -0.0 | -0.2 | compare |
| L-Leucine (C) | -0.2 | -1.2 | compare |
| L-Leucine (C) | -0.2 | -1.6 | compare |
| L-Malic (C) | -0.2 | -1.4 | compare |
| Carbon source L-Ornithine 5 mM | -0.8 | -3.9 | compare |
| Carbon source L-Ornithine 5 mM | -0.9 | -6.1 | compare |
| Carbon source L-Ornithine 10 mM | -1.2 | -6.7 | compare |
| Carbon source L-Ornithine 10 mM | -0.8 | -4.5 | compare |
| L-Tryptophan (C) | -1.0 | -5.4 | compare |
| L-Valine (C) | +0.3 | +1.0 | compare |
| L-Valine (C) | +0.1 | +0.3 | compare |
| m-Inositol (C) | -0.4 | -3.1 | compare |
| m-Inositol (C) | -0.2 | -1.3 | compare |
| RCH2_defined_glucose with MS_media 1x | +0.1 | +0.6 | compare |
| RCH2_defined_glucose with MS_media 1x | -0.0 | -0.2 | compare |
| NAG (C) | -0.3 | -2.0 | compare |
| NAG (C) | -0.2 | -1.2 | compare |
| acetate (C) | -0.2 | -1.3 | compare |
| acetate (C) | -0.1 | -0.6 | compare |
| Putrescine (C) | -0.3 | -2.1 | compare |
| Putrescine (C) | -0.5 | -2.7 | compare |
| D,L-Lactate (C) | +0.1 | +0.5 | compare |
| D,L-Lactate (C) | -0.0 | -0.2 | compare |
| D-Lactate (C) | +0.0 | +0.3 | compare |
| D-Lactate (C) | -0.3 | -1.9 | compare |
| Fumarate (C) | -0.1 | -0.5 | compare |
| Fumarate (C) | -0.1 | -0.6 | compare |
| L-Lactate (C) | +0.1 | +0.7 | compare |
| L-Lactate (C) | -0.1 | -0.6 | compare |
| octanoate (C) | -1.6 | -7.7 | compare |
| octanoate (C) | -1.6 | -8.4 | compare |
| pyruvate (C) | -0.2 | -1.2 | compare |
| pyruvate (C) | -0.0 | -0.3 | compare |
| succinate (C) | -0.2 | -1.7 | compare |
| succinate (C) | -0.1 | -0.6 | compare |
| Trisodium citrate (C) | +0.0 | +0.2 | compare |
| Trisodium citrate (C) | +0.0 | +0.2 | compare |
| Uridine (C) | -0.2 | -1.3 | compare |
| Uridine (C) | -0.1 | -0.7 | compare |
| Xylitol (C) | -0.1 | -0.5 | compare |
| Xylitol (C) | -0.5 | -4.0 | compare |
| ecofab | LB 0.5x in EcoFAB_3.5mL | -0.1 | -0.9 | compare |
| LB in EcoFAB_3.5mL | -0.3 | -1.3 | compare |
| exudates | RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x | +0.2 | +1.5 | compare |
| RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x | +0.2 | +0.8 | compare |
| RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x | +0.0 | +0.2 | compare |
| RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x | +0.2 | +0.9 | compare |
| in planta | Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days | -0.3 | -1.8 | compare |
| Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days | -0.4 | -2.2 | compare |
| Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days | -0.1 | -0.4 | compare |
| Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days | +0.0 | +0.1 | compare |
| Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days | -0.3 | -1.2 | compare |
| Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | -0.3 | -1.5 | compare |
| Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | -0.6 | -2.7 | compare |
| Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | -0.4 | -2.5 | compare |
| Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | -0.2 | -1.1 | compare |
| Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | -0.6 | -3.1 | compare |
| Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | -0.3 | -1.7 | compare |
| Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | -0.2 | -0.7 | compare |
| Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | +0.0 | +0.0 | compare |
| Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | -0.3 | -0.8 | compare |
| Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | -0.5 | -2.3 | compare |
| Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | -0.9 | -3.9 | compare |
| Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | -0.8 | -3.8 | compare |
| Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days | -0.4 | -1.4 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days | -0.2 | -0.8 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days | -0.5 | -2.5 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days | -0.4 | -1.5 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days | -0.6 | -2.3 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days | -0.5 | -2.9 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days | -0.1 | -0.2 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days | -0.2 | -0.8 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days | -0.3 | -0.9 | compare |
| lb | LB_control | +0.1 | +0.5 | compare |
| liquid stress | 80% Methanol 0.5 mM; liquid stress | -0.1 | -0.6 | compare |
| 80% Methanol 0.5 mM; liquid stress | -0.1 | -0.6 | compare |
| 80% Methanol 1 mM; liquid stress | -0.1 | -0.3 | compare |
| 80% Methanol 1 mM; liquid stress | -0.1 | -0.6 | compare |
| 80% Methanol 2 mM; liquid stress | +0.1 | +0.7 | compare |
| 80% Methanol 2 mM; liquid stress | +0.3 | +1.5 | compare |
| 80% Methanol 2 mM; liquid stress | -0.0 | -0.1 | compare |
| 80% Methanol 2 mM; liquid stress | -0.0 | -0.0 | compare |
| 80% Methanol 3 mM; liquid stress | +0.0 | +0.1 | compare |
| 80% Methanol 3 mM; liquid stress | -0.1 | -0.7 | compare |
| 80% Methanol 3 mM; liquid stress | -0.1 | -0.4 | compare |
| 80% Methanol 3 mM; liquid stress | -0.2 | -0.8 | compare |
| Fraxetin 0.5 mM; liquid stress | +0.0 | +0.0 | compare |
| Fraxetin 0.5 mM; liquid stress | -0.3 | -1.6 | compare |
| Fraxetin 1 mM; liquid stress | -0.2 | -1.1 | compare |
| Fraxetin 1 mM; liquid stress | +0.1 | +0.6 | compare |
| Fraxetin 1 mM; liquid stress | -0.3 | -1.8 | compare |
| Fraxetin 1 mM; liquid stress | -0.1 | -0.5 | compare |
| Fraxetin 2 mM; liquid stress | -0.1 | -0.6 | compare |
| Fraxetin 2 mM; liquid stress | -0.2 | -1.6 | compare |
| Fraxetin 2 mM; liquid stress | -0.2 | -1.4 | compare |
| Fraxetin 2 mM; liquid stress | -0.2 | -1.1 | compare |
| Fraxetin 2 mM; liquid stress | -0.1 | -0.7 | compare |
| Fraxetin 3 mM; liquid stress | +0.0 | +0.0 | compare |
| Fraxetin 3 mM; liquid stress | -0.3 | -1.7 | compare |
| Fraxetin 3 mM; liquid stress | -0.2 | -1.1 | compare |
| Fraxetin 3 mM; liquid stress | -0.2 | -1.2 | compare |
| Fraxetin 3 mM; liquid stress | -0.0 | -0.3 | compare |
| Scopoletin 0.5 mM; liquid stress | -0.1 | -0.9 | compare |
| Scopoletin 1 mM; liquid stress | +0.1 | +0.5 | compare |
| Scopoletin 1 mM; liquid stress | -0.2 | -1.5 | compare |
| Scopoletin 1 mM; liquid stress | -0.0 | -0.3 | compare |
| Scopoletin 1 mM; liquid stress | -0.1 | -0.5 | compare |
| Scopoletin 2 mM; liquid stress | +0.0 | +0.1 | compare |
| Scopoletin 2 mM; liquid stress | -0.0 | -0.2 | compare |
| Scopoletin 2 mM; liquid stress | -0.1 | -0.7 | compare |
| Scopoletin 2 mM; liquid stress | -0.1 | -0.6 | compare |
| Scopoletin 3 mM; liquid stress | -0.1 | -0.7 | compare |
| Scopoletin 3 mM; liquid stress | +0.0 | +0.0 | compare |
| Scopoletin 3 mM; liquid stress | -0.0 | -0.1 | compare |
| Scopoletin 3 mM; liquid stress | -0.1 | -0.5 | compare |
| Scopoletin 3 mM; liquid stress | -0.2 | -1.0 | compare |
| motility | outer cut, LB soft agar motility assay | +0.1 | +0.5 | compare |
| outer cut, LB soft agar motility assay | +0.2 | +0.9 | compare |
| outer cut, LB soft agar motility assay | -0.2 | -1.2 | compare |
| outer cut, LB soft agar motility assay | +0.0 | +0.1 | compare |
| inner cut, LB soft agar motility assay | -0.1 | -0.7 | compare |
| inner cut, LB soft agar motility assay | +0.2 | +0.9 | compare |
| inner cut, LB soft agar motility assay | -0.2 | -1.0 | compare |
| inner cut, LB soft agar motility assay | +0.2 | +1.3 | compare |
| motility_chemotaxis | Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.2 | -0.9 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.1 | -0.4 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.5 | -2.4 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.5 | -2.0 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.1 | +0.5 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.1 | -0.4 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.2 | -0.7 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | +0.1 | +0.5 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.2 | -1.0 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.1 | -0.8 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.1 | -0.3 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.3 | +1.5 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.2 | -1.1 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | +0.3 | +1.3 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.0 | +0.2 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.0 | -0.1 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Cysteine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.3 | -2.0 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Cysteine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.0 | -0.2 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.0 | -0.0 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.0 | -0.1 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.2 | -1.2 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.1 | -0.5 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.1 | +0.2 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.5 | -2.2 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | +0.0 | +0.1 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.4 | -2.1 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.0 | -0.3 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.3 | -2.2 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.7 | -3.9 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.1 | -0.6 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.1 | -0.8 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.4 | -1.3 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.4 | -1.2 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.3 | -1.7 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.2 | -1.4 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.5 | -2.0 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Methionine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.2 | -1.1 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Methionine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.1 | -0.4 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Phenylalanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.1 | -0.7 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Phenylalanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.2 | -1.3 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.2 | -1.0 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.1 | -0.4 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.2 | -0.6 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.1 | +0.5 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.4 | -1.8 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.0 | -0.2 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.1 | -0.3 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.4 | -1.9 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.2 | -0.8 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | +0.2 | +0.5 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.4 | -1.8 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.4 | -1.5 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.8 | -3.9 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.8 | -2.8 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-tyrosine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.2 | -1.7 | compare |
| Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.1 | -0.3 | compare |
| Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.0 | -0.3 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.1 | +0.3 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.0 | -0.3 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.0 | +0.3 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.0 | -0.2 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.0 | +0.0 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.1 | -0.3 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.0 | +0.3 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.1 | +0.7 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.0 | -0.1 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.3 | +1.4 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.2 | +0.9 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.0 | +0.2 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.3 | +1.0 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.2 | +0.8 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.1 | +0.5 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.3 | +1.4 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | -0.0 | -0.1 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 | +0.1 | +0.4 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.1 | -0.3 | compare |
| Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 | -0.3 | -1.3 | compare |
| nitrogen source | Adenine (N) | -0.2 | -0.9 | compare |
| Adenosine (N) | +0.5 | +3.7 | compare |
| Ammonium chloride (N) | +0.1 | +0.4 | compare |
| Cytidine (N) | -0.1 | -1.0 | compare |
| Cytosine (N) | -0.2 | -1.1 | compare |
| Glycine (N) | -0.2 | -1.1 | compare |
| Inosine (N) | -1.0 | -5.5 | compare |
| Putrescine (N) | -0.3 | -1.6 | compare |
| nitrate (N) | -3.9 | -12.0 | compare |
| Urea (N) | +0.0 | +0.0 | compare |
| Uridine (N) | -0.0 | -0.1 | compare |
| no phage control | Time6-nophage | -0.3 | -1.4 | compare |
| no stress control | TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1 | +0.0 | +0.1 | compare |
| TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 2 | -0.0 | -0.1 | compare |
| TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1 | +0.1 | +1.0 | compare |
| TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 2 | +0.0 | +0.0 | compare |
| no stress control on plate | growth on LB_noSalt plate | -0.1 | -0.8 | compare |
| growth on LB_noSalt plate | -0.1 | -0.6 | compare |
| nophagecontrol | TIme6-nophage | -0.1 | -0.4 | compare |
| TIme6-nophage | -0.0 | -0.1 | compare |
| Only library | -0.1 | -0.7 | compare |
| phage | P. simiae Grant Run MOI 0.1 | -0.4 | -1.6 | compare |
| P. simiae Grant Run MOI 0.1 | +0.0 | +0.1 | compare |
| P. simiae Grant Run MOI 10 | -0.5 | -2.1 | compare |
| P. simiae Grant Run MOI 10 | +0.1 | +0.4 | compare |
| P. simiae OR Antrim MOI 0.1 | -0.1 | -0.3 | compare |
| P. simiae OR Antrim MOI 0.1 | -0.5 | -2.1 | compare |
| P. simiae OR Antrim MOI 1 | -0.1 | -0.3 | compare |
| P. simiae OR Antrim MOI 1 | +0.0 | +0.1 | compare |
| P. simiae OR Antrim MOI 10 | -0.0 | -0.1 | compare |
| P. simiae OR Antrim MOI 10 | +0.2 | +1.2 | compare |
| P. simiae OR1 MOI 0.1 | +0.4 | +1.7 | compare |
| P. simiae ORA MOI 0.1 | +0.0 | +0.1 | compare |
| P. simiae ORA MOI 0.1 | +0.0 | +0.0 | compare |
| P. simiae ORA MOI 1 | -0.0 | -0.2 | compare |
| P. simiae ORA MOI 10 | +0.2 | +0.8 | compare |
| JP1 MOI 0.1 | +0.3 | +1.1 | compare |
| JP1 MOI 1 | -0.2 | -0.9 | compare |
| JP1 MOI 1 | -0.2 | -1.0 | compare |
| JP1 MOI 10 | -0.1 | -0.4 | compare |
| JP1 MOI 10 | -0.2 | -0.5 | compare |
| Wcs_1 | +0.5 | +1.9 | compare |
| Wcs_0.1 | +0.0 | +0.2 | compare |
| phage moi 100 | Time6-phageFRS | -0.2 | -0.8 | compare |
| r2a control | R2A control | -0.1 | -0.7 | compare |
| r2a control with 0.2% methanol | R2A control with 0.2% methanol | -0.0 | -0.1 | compare |
| r2a control with 0.2x vogels | R2A control with 0.2X Vogels | +0.2 | +1.2 | compare |
| R2A control with 0.2X Vogels | -0.1 | -0.8 | compare |
| rhizosphere | rhizosphere sample 1; outgrowth in LB | -0.3 | -1.2 | compare |
| rhizosphere sample 2; outgrowth in LB | -0.3 | -1.1 | compare |
| rhizosphere sample 8; outgrowth in LB | -0.2 | -0.6 | compare |
| root | root sample 6; outgrowth in LB | -0.6 | -2.3 | compare |
| seeds | Growth on radish seeds for 24 hours | -0.5 | -2.4 | compare |
| Growth on radish seeds for 72 hours | -0.2 | -0.9 | compare |
| Growth on radish seeds for 72 hours | -0.3 | -1.6 | compare |
| Growth on radish seeds for 72 hours | +0.0 | +0.1 | compare |
| soil | soil sample 2; outgrowth in LB | +0.1 | +0.3 | compare |
| soil sample 3; outgrowth in LB | -0.3 | -1.3 | compare |
| soil sample 4; outgrowth in LB | +0.1 | +0.3 | compare |
| soil sample 5; outgrowth in LB | +0.2 | +0.8 | compare |
| soil sample 6; outgrowth in LB | -0.1 | -0.4 | compare |
| soil sample 7; outgrowth in LB | -0.4 | -1.3 | compare |
| soil sample 8; outgrowth in LB | -0.1 | -0.3 | compare |
| solid stress | 80% Methanol 0.5 mM; solid stress | -0.4 | -2.0 | compare |
| 80% Methanol 0.5 mM; solid stress | -0.2 | -1.5 | compare |
| 80% Methanol 0.5 mM; solid stress | -0.0 | -0.1 | compare |
| 80% Methanol 1 mM; solid stress | +0.0 | +0.1 | compare |
| 80% Methanol 1 mM; solid stress | -0.2 | -1.3 | compare |
| 80% Methanol 1 mM; solid stress | -0.4 | -2.7 | compare |
| 80% Methanol 2 mM; solid stress | -0.3 | -1.7 | compare |
| 80% Methanol 2 mM; solid stress | -0.2 | -1.0 | compare |
| 80% Methanol 2 mM; solid stress | -0.1 | -1.0 | compare |
| 80% Methanol 2 mM; solid stress | -0.0 | -0.1 | compare |
| 80% Methanol 3 mM; solid stress | -0.3 | -1.4 | compare |
| 80% Methanol 3 mM; solid stress | -0.1 | -0.8 | compare |
| 80% Methanol 3 mM; solid stress | -0.1 | -0.4 | compare |
| 80% Methanol 3 mM; solid stress | -0.2 | -1.3 | compare |
| 80% Methanol 3 mM; solid stress | +0.1 | +0.3 | compare |
| Fraxetin 0.5 mM; solid stress | -0.2 | -1.2 | compare |
| Fraxetin 0.5 mM; solid stress | -0.2 | -1.4 | compare |
| Fraxetin 0.5 mM; solid stress | -0.1 | -0.6 | compare |
| Fraxetin 0.5 mM; solid stress | -0.2 | -1.6 | compare |
| Fraxetin 0.5 mM; solid stress | -0.2 | -1.0 | compare |
| Fraxetin 1 mM; solid stress | +0.0 | +0.1 | compare |
| Fraxetin 1 mM; solid stress | -0.1 | -0.5 | compare |
| Fraxetin 1 mM; solid stress | -0.3 | -1.6 | compare |
| Fraxetin 1 mM; solid stress | +0.0 | +0.2 | compare |
| Fraxetin 1 mM; solid stress | +0.0 | +0.1 | compare |
| Fraxetin 2 mM; solid stress | -0.2 | -1.3 | compare |
| Fraxetin 2 mM; solid stress | -0.2 | -0.9 | compare |
| Fraxetin 2 mM; solid stress | -0.1 | -0.4 | compare |
| Fraxetin 2 mM; solid stress | -0.4 | -1.9 | compare |
| Fraxetin 2 mM; solid stress | -0.1 | -0.4 | compare |
| Fraxetin 3 mM; solid stress | -0.6 | -3.1 | compare |
| Fraxetin 3 mM; solid stress | -0.6 | -3.0 | compare |
| Fraxetin 3 mM; solid stress | -0.6 | -2.6 | compare |
| Fraxetin 3 mM; solid stress | -0.8 | -3.7 | compare |
| Scopoletin 0.5 mM; solid stress | +0.0 | +0.1 | compare |
| Scopoletin 0.5 mM; solid stress | -0.2 | -1.4 | compare |
| Scopoletin 0.5 mM; solid stress | -0.0 | -0.2 | compare |
| Scopoletin 1 mM; solid stress | -0.2 | -0.8 | compare |
| Scopoletin 1 mM; solid stress | -0.4 | -2.2 | compare |
| Scopoletin 1 mM; solid stress | -0.0 | -0.0 | compare |
| Scopoletin 1 mM; solid stress | +0.1 | +0.5 | compare |
| Scopoletin 1 mM; solid stress | +0.1 | +0.4 | compare |
| Scopoletin 2 mM; solid stress | -0.1 | -0.4 | compare |
| Scopoletin 2 mM; solid stress | -0.2 | -1.0 | compare |
| Scopoletin 2 mM; solid stress | -0.3 | -1.8 | compare |
| Scopoletin 2 mM; solid stress | -0.2 | -1.7 | compare |
| Scopoletin 2 mM; solid stress | -0.3 | -1.9 | compare |
| Scopoletin 3 mM; solid stress | -0.1 | -0.8 | compare |
| Scopoletin 3 mM; solid stress | -0.1 | -0.6 | compare |
| Scopoletin 3 mM; solid stress | -0.2 | -1.5 | compare |
| Scopoletin 3 mM; solid stress | -0.2 | -1.3 | compare |
| Scopoletin 3 mM; solid stress | -0.1 | -0.4 | compare |
| stress | 1-ethyl-3-methylimidazolium acetate 35 mM | +0.2 | +1.2 | compare |
| 1-ethyl-3-methylimidazolium chloride 200 mM | -0.7 | -4.2 | compare |
| 2-Furfuraldehyde 0.03 vol% | -1.2 | -6.2 | compare |
| 2-Furfuraldehyde 0.06 vol% | -1.3 | -7.8 | compare |
| 6-methoxy-2(3H)-benzoxazolone 0.5 mM | -0.1 | -0.7 | compare |
| 6-methoxy-2(3H)-benzoxazolone 1.2 mM | -0.2 | -1.1 | compare |
| 6-methoxy-2(3H)-benzoxazolone 1.2 mM | -0.1 | -0.6 | compare |
| 6-methoxy-2(3H)-benzoxazolone 2.5 mM | -0.3 | -1.8 | compare |
| TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 500 uM; timepoint 1 | +0.0 | +0.3 | compare |
| TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1 | +0.1 | +0.8 | compare |
| TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 2 | -0.1 | -0.4 | compare |
| TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 2 | +0.0 | +0.3 | compare |
| TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1 | -0.0 | -0.1 | compare |
| TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 2 | +0.1 | +0.9 | compare |
| TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2 | +0.0 | +0.1 | compare |
| TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2 | -0.2 | -1.3 | compare |
| TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1 | -0.0 | -0.0 | compare |
| TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2 | +0.0 | +0.4 | compare |
| TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2 | +0.0 | +0.1 | compare |
| Aluminum chloride 4 mM | +0.1 | +0.6 | compare |
| Bacitracin 1 mg/ml | -0.2 | -1.3 | compare |
| Bacitracin 2 mg/ml | -0.2 | -1.2 | compare |
| Benzalkonium Chloride 0.012 mg/ml | +0.1 | +0.9 | compare |
| Chloramphenicol 0.0075 mg/ml | -0.1 | -0.3 | compare |
| Chloramphenicol 0.015 mg/ml | +0.2 | +1.4 | compare |
| Choline chloride 300 mM | -0.3 | -1.6 | compare |
| Choline Lysine 25 mM | -0.1 | -0.9 | compare |
| Cisplatin 0.01 mg/ml | -0.4 | -2.2 | compare |
| Cobalt chloride 0.16 mM | +0.1 | +0.5 | compare |
| Dimethyl Sulfoxide 4 vol% | +0.1 | +0.3 | compare |
| Dimethyl Sulfoxide 5 vol% | -0.3 | -1.8 | compare |
| Doxycycline hyclate 0.001 mg/ml | +0.1 | +0.6 | compare |
| R2A with Fusaric 120 ug/mL | -0.0 | -0.0 | compare |
| R2A with Fusaric 120 ug/mL | +0.2 | +1.0 | compare |
| R2A with Fusaric 120 ug/mL | +0.1 | +0.8 | compare |
| R2A with Fusaric 120 ug/mL | +0.3 | +1.4 | compare |
| R2A with Fusaric 120 ug/mL | -0.2 | -1.4 | compare |
| R2A with Fusaric 120 ug/mL | +0.2 | +1.6 | compare |
| Gentamicin 0.008 mg/ml | -0.5 | -2.5 | compare |
| L-Lysine 60 mM | +0.0 | +0.3 | compare |
| Lomefloxacin 0.0001 mM | -0.2 | -1.1 | compare |
| methylglyoxal 0.032 vol% | +0.5 | +1.9 | compare |
| A22 0.16 mg/ml | -0.0 | -0.0 | compare |
| Nalidixic 0.015 mg/ml | -0.2 | -1.1 | compare |
| Nalidixic 0.025 mg/ml | -0.3 | -1.6 | compare |
| Neomycin 0.04 mg/ml | -0.2 | -0.9 | compare |
| Nickel (II) chloride 1 mM | +0.3 | +1.7 | compare |
| Paraquat dichloride 0.002 mg/ml | -0.8 | -4.2 | compare |
| Paraquat dichloride 0.008 mg/ml | -0.8 | -3.9 | compare |
| Phosphomycin 0.001 mg/ml | +0.3 | +2.1 | compare |
| Phosphomycin 0.002 mg/ml | +0.1 | +0.5 | compare |
| Phosphomycin 0.003 mg/ml | +0.0 | +0.0 | compare |
| R2A with Polymyxin B sulfate 0.002 mg/ml | -0.1 | -0.5 | compare |
| R2A with Polymyxin B sulfate 0.002 mg/ml | +0.1 | +0.3 | compare |
| R2A with Polymyxin B sulfate 0.002 mg/ml | +0.4 | +1.3 | compare |
| R2A with Polymyxin B sulfate 0.002 mg/ml | -0.2 | -1.5 | compare |
| R2A with Polymyxin B sulfate 0.002 mg/ml | -0.2 | -1.2 | compare |
| R2A with Polymyxin B sulfate 0.002 mg/ml | -0.1 | -0.4 | compare |
| R2A with Polymyxin B sulfate 0.003 mg/ml | +0.0 | +0.1 | compare |
| R2A with Polymyxin B sulfate 0.003 mg/ml | +0.0 | +0.2 | compare |
| R2A with Polymyxin B sulfate 0.003 mg/ml | -0.2 | -1.1 | compare |
| R2A with Polymyxin B sulfate 0.003 mg/ml | -0.1 | -0.5 | compare |
| R2A with Polymyxin B sulfate 0.003 mg/ml | +0.3 | +1.6 | compare |
| R2A with Polymyxin B sulfate 0.003 mg/ml | -0.4 | -1.3 | compare |
| Polymyxin B sulfate 0.006 mg/ml | +0.1 | +1.0 | compare |
| NaCl stress 25 mM | -0.3 | -1.9 | compare |
| NaCl stress 250 mM | -0.1 | -0.7 | compare |
| NaCl stress 250 mM | -0.2 | -1.4 | compare |
| LB_noSalt with Chloride 500 mM | +0.1 | +0.6 | compare |
| LB_noSalt with Chloride 500 mM | -0.1 | -0.8 | compare |
| LB_noSalt with Chloride 1100 mM | +0.1 | +0.5 | compare |
| LB_noSalt with Chloride 1100 mM | -0.0 | -0.3 | compare |
| Chlorite 4 mM | +0.9 | +5.8 | compare |
| nitrate 200 mM | +0.1 | +0.6 | compare |
| Spectinomycin 0.4 mg/ml | -0.0 | -0.1 | compare |
| Tetracycline 0.001 mg/ml | -0.1 | -0.5 | compare |
| Thallium(I) acetate 0.0625 mg/ml | +0.1 | +0.7 | compare |
| supernatant | Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X | -0.2 | -1.3 | compare |
| Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X | -0.1 | -0.6 | compare |
| Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X | -0.2 | -1.0 | compare |
| Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X | +0.0 | +0.2 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X | -0.1 | -0.7 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X | -0.1 | -0.4 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X | -0.2 | -1.4 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB | +0.1 | +0.4 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB | +0.2 | +1.2 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB | +0.1 | +0.7 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB | +0.0 | +0.1 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X | +0.1 | +0.7 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X | +0.1 | +0.4 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB | -0.1 | -0.3 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB | +0.1 | +0.5 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB | +0.0 | +0.2 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB | +0.1 | +0.4 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB | -0.0 | -0.2 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X | +0.3 | +1.4 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X | +0.0 | +0.2 | compare |
| Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X | -0.1 | -0.8 | compare |
| Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X | -0.2 | -1.0 | compare |
| LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x | -0.1 | -0.5 | compare |
| RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x | -0.1 | -0.5 | compare |
| LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x | -0.4 | -2.5 | compare |
| RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x | +0.1 | +0.5 | compare |
| RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x | -0.1 | -0.4 | compare |
| RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x | +0.1 | +0.8 | compare |
| LB 0.5x with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x | +0.1 | +0.6 | compare |
| Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x | -0.1 | -0.8 | compare |
| LB 0.5x with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x | +0.1 | +0.6 | compare |
| Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x | -0.9 | -4.3 | compare |
| Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x | -1.0 | -6.4 | compare |
| RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x | +0.2 | +1.1 | compare |
| RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x | +0.0 | +0.0 | compare |
| RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x | +0.0 | +0.1 | compare |
| RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x | +0.2 | +1.2 | compare |
| RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x | -0.2 | -0.8 | compare |
| RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x | +0.2 | +0.8 | compare |
| RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x | +0.2 | +1.1 | compare |
| RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x | +0.3 | +1.4 | compare |
| Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x | +0.0 | +0.0 | compare |
| Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x | +0.6 | +4.5 | compare |
| Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x | +0.7 | +3.9 | compare |
| supernatant control | Vogels_fungal_media 0.1X | -0.2 | -0.7 | compare |
| Vogels_fungal_media 0.1X | +0.0 | +0.1 | compare |
| Vogels_fungal_media; pH 5.5 | +0.3 | +1.5 | compare |
| Vogels_fungal_media; pH 5.5 | +0.1 | +0.4 | compare |
| Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB | +0.3 | +1.2 | compare |
| Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB | +0.2 | +1.0 | compare |
| Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB | -0.0 | -0.2 | compare |
| Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB | +0.0 | +0.1 | compare |
| supernatant control:fungal media | R2A with Vogels_fungal_media 0.2X | +0.0 | +0.0 | compare |
| R2A with Vogels_fungal_media 0.2X | -0.3 | -1.8 | compare |
| R2A with Vogels_fungal_media 0.8X | -0.2 | -1.0 | compare |
| R2A with Vogels_fungal_media 0.8X | -0.3 | -1.6 | compare |
| R2A with Vogels_fungal_media 0.8X | -0.1 | -0.4 | compare |
| R2A with Vogels_fungal_media 0.8X | -0.1 | -0.5 | compare |
| temperature | LB 42C | +0.1 | +0.9 | compare |
| LB 42C | -0.2 | -1.2 | compare |
| LB_noSalt 30C | +0.1 | +0.3 | compare |