Fitness data for PS417_21310 in Pseudomonas simiae WCS417

AraC family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.7 -3.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -3.0 compare
phage P. simiae OR Antrim MOI 1 -0.5 -2.4 compare
stress methylglyoxal 0.032 vol% -0.5 -1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.4 compare
seeds Growth on radish seeds for 72 hours -0.4 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -2.1 compare
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.4 -2.4 compare
carbon source L-Isoleucine (C) -0.4 -2.2 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.4 -0.8 compare
carbon source L-Valine (C) -0.4 -1.2 compare
stress 6-methoxy-2(3H)-benzoxazolone 1.2 mM -0.4 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.3 -1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.3 -1.6 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.4 +1.5 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x +0.4 +1.6 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x +0.4 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.1 compare
stress Nalidixic 0.025 mg/ml +0.5 +2.2 compare