Fitness data for PS417_21275 in Pseudomonas simiae WCS417

GntR family transcriptional regulator
SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source L-Valine (C) -4.8 -11.6 compare
carbon source L-Valine (C) -4.4 -11.7 compare
carbon source L-Isoleucine (C) -2.2 -11.3 compare
solid stress Fraxetin 3 mM; solid stress -1.5 -7.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -5.6 compare
solid stress Fraxetin 3 mM; solid stress -1.1 -6.9 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.0 -5.6 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -1.0 -5.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -5.0 compare
solid stress Fraxetin 3 mM; solid stress -0.9 -5.4 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.8 -3.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +4.1 compare
soil soil sample 7; outgrowth in LB +0.8 +5.2 compare
soil soil sample 8; outgrowth in LB +0.9 +5.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.1 +8.0 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +1.3 +8.6 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +2.5 +19.1 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +3.0 +22.7 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +3.0 +22.5 compare
soil soil sample 4; outgrowth in LB +3.1 +21.8 compare