Fitness data for PS417_21235 in Pseudomonas simiae WCS417

transglutaminase
SEED: Protein containing transglutaminase-like domain, putative cysteine protease

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.8 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.0 -3.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.6 compare
phage P. simiae OR Antrim MOI 1 -0.9 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.8 -1.7 compare
motility outer cut, LB soft agar motility assay -0.8 -3.2 compare
phage Wcs_1 -0.8 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.2 compare
phage P. simiae ORA MOI 0.1 -0.7 -2.2 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.7 -1.9 compare
soil soil sample 2; outgrowth in LB -0.7 -2.0 compare
stress Phosphomycin 0.002 mg/ml -0.7 -2.5 compare
phage Wcs_0.1 -0.6 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.5 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.7 +2.2 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.7 +1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.0 compare
carbon source 2-Deoxy-D-Ribose (C) +0.8 +3.1 compare