Fitness data for PS417_20880 in Pseudomonas simiae WCS417

GntR family transcriptional regulator
SEED: Transcriptional regulator, GntR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
phage JP1 MOI 1 -3.0 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.8 -1.9 compare
phage JP1 MOI 10 -2.4 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.3 -1.9 compare
stress Cisplatin 0.01 mg/ml -1.9 -3.3 compare
liquid stress Scopoletin 3 mM; liquid stress -1.8 -3.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.8 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.6 -1.9 compare
phage P. simiae ORA MOI 0.1 -1.6 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.6 -2.3 compare
phage JP1 MOI 1 -1.6 -1.9 compare
motility inner cut, LB soft agar motility assay -1.6 -2.8 compare
stress nitrate 200 mM -1.5 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.5 -2.0 compare
motility inner cut, LB soft agar motility assay -1.5 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.5 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.8 +2.5 compare
carbon source octanoate (C) +1.9 +8.4 compare
carbon source octanoate (C) +1.9 +7.6 compare