Fitness data for PS417_20835 in Pseudomonas simiae WCS417

LysR family transcriptional regulator
SEED: Transcriptional regulators, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.8 compare
carbon source Deoxyribonucleic from herring sperm 5 mg/mL (C) -0.7 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.2 compare
phage P. simiae Grant Run MOI 10 -0.6 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.3 compare
stress methylglyoxal 0.032 vol% -0.5 -1.0 compare
carbon source NAG (C) -0.5 -3.0 compare
phage Wcs_1 -0.5 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.2 compare
motility outer cut, LB soft agar motility assay -0.5 -1.7 compare
carbon source octanoate (C) -0.5 -1.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +2.0 compare
phage JP1 MOI 0.1 +0.5 +1.6 compare
phage JP1 MOI 1 +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.6 compare
stress Gentamicin 0.008 mg/ml +0.6 +1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +1.0 compare
seeds Growth on radish seeds for 72 hours +0.7 +1.6 compare