Fitness data for PS417_20740 in Pseudomonas simiae WCS417

prevent-host-death protein
SEED: VapB protein (antitoxin to VapC)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB -0.8 -4.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.8 -2.0 compare
supernatant control Vogels_fungal_media 0.1X -0.7 -2.1 compare
phage P. simiae OR Antrim MOI 0.1 -0.6 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.3 compare
stress LB_noSalt with Chloride 1100 mM -0.6 -2.3 compare
phage JP1 MOI 10 -0.5 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -1.9 compare
solid stress Fraxetin 0.5 mM; solid stress -0.5 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -0.9 compare
soil soil sample 4; outgrowth in LB +0.5 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.0 compare
stress A22 0.16 mg/ml +0.5 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.6 compare
root root sample 6; outgrowth in LB +0.8 +1.0 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.9 +1.4 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +1.1 +1.4 compare