Fitness data for PS417_20720 in Pseudomonas simiae WCS417

cbb3-type cytochrome c oxidase subunit I
SEED: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1)
KEGG: cb-type cytochrome c oxidase subunit I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.3 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.9 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.1 -1.8 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.0 -2.0 compare
soil soil sample 8; outgrowth in LB -0.9 -2.1 compare
carbon source L-Leucine (C) -0.9 -1.9 compare
supernatant control Vogels_fungal_media 0.1X -0.8 -1.4 compare
carbon source L-Arginine (C) -0.8 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.2 compare
carbon source acetate (C) -0.8 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB -0.8 -2.7 compare
phage P. simiae OR Antrim MOI 1 -0.8 -1.5 compare
phage JP1 MOI 0.1 -0.8 -1.7 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.4 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.8 -2.0 compare
carbon source D-Galacturonic Acid (C) -0.8 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +2.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.4 +4.0 compare