Fitness data for PS417_20280 in Pseudomonas simiae WCS417

mechanosensitive ion channel protein MscS
SEED: Small-conductance mechanosensitive channel

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.8 -3.3 compare
liquid stress Scopoletin 3 mM; liquid stress -0.8 -2.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -1.4 compare
carbon source L-Valine (C) -0.7 -2.0 compare
seeds Growth on radish seeds for 72 hours -0.7 -2.2 compare
carbon source Carbon source D-Mannitol 10 mM -0.7 -3.4 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.6 -1.9 compare
seeds Growth on radish seeds for 72 hours -0.6 -1.6 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x +0.6 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.7 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +3.0 compare
phage Wcs_1 +0.7 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.8 +2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.8 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.6 compare
motility inner cut, LB soft agar motility assay +0.9 +2.8 compare
phage JP1 MOI 1 +1.0 +2.5 compare
stress Gentamicin 0.008 mg/ml +1.0 +3.4 compare