Fitness data for PS417_20055 in Pseudomonas simiae WCS417

cob(II)yrinic acid a,c-diamide reductase
SEED: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
KEGG: 5,6-dimethylbenzimidazole synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source 2'-Deoxyinosine 5 mM (C) -1.5 -1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.3 -2.1 compare
phage P. simiae OR Antrim MOI 0.1 -1.2 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.2 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.6 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.0 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.6 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.0 -2.5 compare
soil soil sample 6; outgrowth in LB -0.9 -1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.0 compare
carbon source D-Glucosamine Hydrochloride (C) -0.9 -2.8 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.9 -1.9 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.9 -2.0 compare
carbon source Carbon source D-Mannitol 2.5 mM -0.9 -2.5 compare
motility inner cut, LB soft agar motility assay +0.9 +2.6 compare
phage P. simiae Grant Run MOI 10 +1.0 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +1.3 compare
seeds Growth on radish seeds for 24 hours +1.3 +2.8 compare