Fitness data for PS417_19720 in Pseudomonas simiae WCS417

DNA-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.3 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.0 -1.1 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.9 -1.7 compare
phage P. simiae Grant Run MOI 0.1 -1.8 -1.3 compare
liquid stress Fraxetin 2 mM; liquid stress -1.8 -1.4 compare
stress Nickel (II) chloride 1 mM -1.7 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.7 -2.1 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.7 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5 -1.6 compare
phage JP1 MOI 1 -1.4 -1.0 compare
motility inner cut, LB soft agar motility assay +1.4 +2.3 compare
motility inner cut, LB soft agar motility assay +1.5 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.5 +2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.6 +2.6 compare
carbon source L-Valine (C) +1.6 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.8 +2.3 compare
motility outer cut, LB soft agar motility assay +1.8 +3.4 compare
motility outer cut, LB soft agar motility assay +2.1 +3.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.1 +2.6 compare
motility outer cut, LB soft agar motility assay +2.4 +2.8 compare