Fitness data for PS417_01960 in Pseudomonas simiae WCS417

pilus assembly protein
SEED: Type IV pilus biogenesis protein PilM

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.4 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.5 compare
phage P. simiae OR Antrim MOI 10 -0.8 -2.0 compare
motility inner cut, LB soft agar motility assay -0.8 -2.5 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.7 +3.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +1.8 compare
solid stress 80% Methanol 3 mM; solid stress +0.7 +2.4 compare
phage P. simiae ORA MOI 0.1 +0.8 +1.5 compare
soil soil sample 2; outgrowth in LB +0.8 +1.6 compare
phage JP1 MOI 1 +0.8 +1.6 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.8 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.9 +2.6 compare
soil soil sample 4; outgrowth in LB +0.9 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.3 compare
soil soil sample 7; outgrowth in LB +0.9 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +1.7 compare
phage JP1 MOI 1 +1.1 +2.4 compare