Fitness data for PS417_19570 in Pseudomonas simiae WCS417

terpene utilization protein AtuA
SEED: 3-hydroxy-3isohexenylglutaryl-CoA:acetate lyase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. simiae Grant Run MOI 0.1 -0.6 -2.8 compare
phage JP1 MOI 10 -0.5 -1.7 compare
phage P. simiae OR Antrim MOI 1 -0.5 -2.3 compare
phage P. simiae ORA MOI 10 -0.4 -2.2 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 -1.8 compare
phage P. simiae Grant Run MOI 10 -0.4 -1.5 compare
phage P. simiae Grant Run MOI 10 -0.4 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3 -1.6 compare
phage JP1 MOI 1 -0.3 -1.7 compare
motility outer cut, LB soft agar motility assay -0.3 -1.8 compare
phage P. simiae OR Antrim MOI 10 -0.3 -1.5 compare
carbon source NAG (C) -0.3 -2.0 compare
supernatant control Vogels_fungal_media 0.1X -0.3 -1.4 compare
phage P. simiae ORA MOI 0.1 -0.3 -1.6 compare
phage P. simiae OR Antrim MOI 0.1 -0.3 -1.6 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.3 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.7 compare
no phage control Time6-nophage +0.4 +2.2 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.4 compare