Fitness data for PS417_19555 in Pseudomonas simiae WCS417

RNA polymerase sigma70
SEED: Sigma factor PvdS, controling pyoverdin biosynthesis
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -3.6 -6.0 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -1.5 -4.2 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.4 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.9 -3.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.6 compare
solid stress 80% Methanol 1 mM; solid stress +0.8 +4.1 compare
solid stress Scopoletin 0.5 mM; solid stress +0.8 +4.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +4.1 compare
solid stress Scopoletin 0.5 mM; solid stress +0.9 +4.9 compare
solid stress 80% Methanol 3 mM; solid stress +1.0 +5.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.0 +3.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 +4.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.1 +2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +4.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.8 +7.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +2.0 +7.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +2.5 +7.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +2.8 +8.9 compare