Fitness data for PS417_19550 in Pseudomonas simiae WCS417

thioesterase
SEED: Thioesterase PvdG involved in non-ribosomal peptide biosynthesis

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source 2'-Deoxyinosine 5 mM (C) -1.4 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.1 compare
phage P. simiae ORA MOI 0.1 -0.8 -2.2 compare
phage P. simiae OR Antrim MOI 10 -0.8 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.5 compare
motility outer cut, LB soft agar motility assay -0.7 -1.7 compare
phage P. simiae ORA MOI 1 -0.6 -1.6 compare
seeds Growth on radish seeds for 24 hours -0.6 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.7 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol +0.7 +3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.9 compare
solid stress 80% Methanol 1 mM; solid stress +0.7 +2.9 compare
phage P. simiae Grant Run MOI 10 +0.8 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.8 +1.9 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +1.8 +7.2 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +2.5 +10.1 compare