Fitness data for PS417_19305 in Pseudomonas simiae WCS417

acireductone dioxygenase
SEED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54)
KEGG: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source octanoate (C) -1.7 -4.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.6 -2.4 compare
stress 1-ethyl-3-methylimidazolium acetate 35 mM -1.5 -4.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -3.3 compare
phage JP1 MOI 10 -1.2 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.7 compare
phage JP1 MOI 10 -1.2 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -1.9 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -1.1 -2.2 compare
carbon source octanoate (C) -1.1 -3.9 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -1.1 -1.9 compare
stress 6-methoxy-2(3H)-benzoxazolone 2.5 mM -1.0 -2.6 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -2.2 compare
soil soil sample 5; outgrowth in LB -1.0 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -2.0 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.0 -1.7 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.0 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.0 -2.4 compare
liquid stress Scopoletin 3 mM; liquid stress -0.9 -3.0 compare