Fitness data for PS417_19140 in Pseudomonas simiae WCS417

TenA family transcriptional regulator
SEED: Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nophagecontrol Only library -0.7 -2.8 compare
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.5 -2.4 compare
solid stress Fraxetin 2 mM; solid stress -0.5 -2.3 compare
carbon source octanoate (C) -0.5 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -2.2 compare
solid stress Fraxetin 2 mM; solid stress -0.4 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.4 +1.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +1.7 compare
soil soil sample 4; outgrowth in LB +0.5 +0.9 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +0.5 +2.5 compare
stress Gentamicin 0.008 mg/ml +0.6 +1.7 compare
soil soil sample 3; outgrowth in LB +0.7 +1.5 compare
soil soil sample 7; outgrowth in LB +0.7 +2.1 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.7 +1.4 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.7 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9 +1.5 compare
root root sample 6; outgrowth in LB +1.0 +2.1 compare