Fitness data for PS417_19125 in Pseudomonas simiae WCS417

LysR family transcriptional regulator
SEED: LysR family regulatory protein CidR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
stress Gentamicin 0.008 mg/ml -1.8 -3.1 compare
carbon source L-Lactate (C) -1.6 -6.2 compare
carbon source L-Lactate (C) -1.3 -3.7 compare
solid stress Fraxetin 2 mM; solid stress -1.1 -1.7 compare
carbon source Carbon source D-Mannitol 10 mM -1.1 -2.3 compare
carbon source Carbon source L-Ornithine 5 mM -1.0 -2.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.6 compare
supernatant control Vogels_fungal_media 0.1X -0.9 -1.3 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.9 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.1 +2.0 compare
motility outer cut, LB soft agar motility assay +1.1 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.2 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.3 +2.7 compare
phage JP1 MOI 10 +1.3 +2.5 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.4 +3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.4 +3.7 compare