Fitness data for PS417_19040 in Pseudomonas simiae WCS417

aspartate racemase
SEED: Aspartate racemase
KEGG: aspartate racemase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. simiae OR1 MOI 0.1 -0.6 -2.9 compare
phage P. simiae OR Antrim MOI 1 -0.6 -2.6 compare
phage P. simiae OR Antrim MOI 1 -0.6 -2.8 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.5 -2.6 compare
nophagecontrol Only library -0.5 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.3 -1.5 compare
phage P. simiae OR Antrim MOI 10 -0.3 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 -2.2 compare
liquid stress Fraxetin 2 mM; liquid stress -0.3 -1.9 compare
no phage control Time6-nophage +0.3 +1.8 compare
stress Phosphomycin 0.001 mg/ml +0.3 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.0 compare
seeds Growth on radish seeds for 72 hours +0.4 +1.9 compare
carbon source L-Valine (C) +0.4 +1.8 compare