Fitness data for PS417_19010 in Pseudomonas simiae WCS417

LysR family transcriptional regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source 2'-Deoxyinosine 5 mM (C) -1.0 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -3.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -2.7 compare
carbon source Carbon source L-Citrulline 5 mM -0.7 -2.6 compare
phage JP1 MOI 1 -0.7 -1.6 compare
stress Phosphomycin 0.003 mg/ml -0.7 -2.2 compare
solid stress 80% Methanol 0.5 mM; solid stress -0.7 -2.9 compare
seeds Growth on radish seeds for 72 hours -0.6 -1.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -1.4 compare
stress methylglyoxal 0.032 vol% -0.6 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -1.8 compare
phage P. simiae OR1 MOI 0.1 +0.6 +2.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +1.8 compare
phage P. simiae Grant Run MOI 10 +0.6 +0.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.3 compare